André Falcão
PAST
| Acronym | Title | Funding Entity | Start Date | End Date |
|---|---|---|---|---|
| SMiLax | Semantic Mining with Linked Data | FCT | 01/07/2016 | 31/12/2020 |
| MIMED | Mining the Molecular Metric Space for Drug Design | FCT | 01/06/2016 | 30/11/2019 |
| VIRUS | Video Information Retieval Using Subtitles | FCT | 01/01/2010 | 30/06/2012 |
| ARN | Algorithms for the identification of genetic Regulatory Networks | FCT | 01/11/2007 | 31/10/2010 |
| FOGOS | Decision support tools for integrating fire and forest management planning | FCT | 04/06/2007 | 31/03/2010 |
Catarina Franco, Samina Kausar, Margarida F. B. Silva, Rita C. Guedes, Andre O. Falcao, Maria Alexandra Brito. Multi-Targeting Approach in Glioblastoma Using Computer-Assisted Drug Discovery Tools to Overcome the Blood–Brain Barrier and Target EGFR/PI3Kp110β Signaling. Cancers, 14(14), MDPI AG, 2022 [Biblios]
Catarina Pereira, Alexander Mazein, Carlos M. Farinha, Michael A. Gray, Karl Kunzelmann, Marek Ostaszewski, Irina Balaur, Margarida D. Amaral, Andre O. Falcao. CyFi-MAP: an interactive pathway-based resource for cystic fibrosis. Scientific Reports, 11(1), Springer Science and Business Media LLC, 2021 [Biblios]
Samina Kausar, Andre O. Falcao. A visual approach for analysis and inference of molecular activity spaces. Journal of Cheminformatics, 11(1), Springer Science and Business Media LLC, 2019 [Biblios]
Michael P. Menden, Dennis Wang, Mike J. Mason, Bence Szalai, Krishna C. Bulusu, Yuanfang Guan, Thomas Yu, Jaewoo Kang, Minji Jeon, Russ Wolfinger, Tin Nguyen, Mikhail Zaslavskiy, In Sock Jang, Zara Ghazoui, Mehmet Eren Ahsen, Robert Vogel, Elias Chaibub Neto, Thea Norman, Eric K. Y. Tang, Mathew J. Garnett, Giovanni Y. Di Veroli, Stephen Fawell, Gustavo Stolovitzky, Justin Guinney, Jonathan R. Dry, Julio Saez-Rodriguez, Falcao AO [member of AZ consortium]. Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen. Nature Communications, 10(1), Springer Science and Business Media LLC, 2019 [Biblios]
Samina Kausar, Andre O. Falcao. Analysis and Comparison of Vector Space and Metric Space Representations in QSAR Modeling. Molecules, 24(9), MDPI AG, 2019 [Biblios]
João D. Santos, Sara Canato, Ana S. Carvalho, Hugo M. Botelho, Kerman Aloria, Margarida D. Amaral, Rune Matthiesen, Andre O. Falcao, Carlos M. Farinha. Folding Status Is Determinant over Traffic-Competence in Defining CFTR Interactors in the Endoplasmic Reticulum. Cells, 8(4), MDPI AG, 2019 [Biblios]
Samina Kausar, Andre O. Falcao. An automated framework for QSAR model building. Journal of Cheminformatics, 10(1), Springer Nature, 2018 [Biblios]
Tiago Filipe dos Santos Pacheco, Falcão, André Osório e Cruz de Azerêdo. A clustering analysis of the chemical metric space. Master's dissertation, 2018 [Biblios]
S. Canato, A.S. Carvalho, H.M. Botelho, K. Aloria, R. Matthiesen, M.D. Amaral, A. Falcão, C.M. Farinha. WS09.2 Modulation of protein traffic networks to rescue F508del-CFTR from the endoplasmic reticulum. In Journal of Cystic Fibrosis, pages S16. Elsevier BV, 2017 [Biblios]
Andreas Keller, Richard C. Gerkin, Yuanfang Guan, Amit Dhurandhar, Gabor Turu, Bence Szalai, Joel D. Mainland, Yusuke Ihara, Chung Wen Yu, Russ Wolfinger, Celine Vens, Leander Schietgat, Kurt De Grave, Raquel Norel, Gustavo Stolovitzky, Guillermo A. Cecchi, Leslie B. Vosshall, Pablo Meyer, AO Falcao (within consortium). Predicting human olfactory perception from chemical features of odor molecules. Science, 355(6327):820-826, American Association for the Advancement of Science (AAAS), 2017 [Biblios]
Solveig K. Sieberts, Fan Zhu, Javier García-García, Eli Stahl, Abhishek Pratap, Gaurav Pandey, Dimitrios Pappas, Daniel Aguilar, Bernat Anton, Jaume Bonet, Ridvan Eksi, Oriol Fornés, Emre Guney, Hongdong Li, Manuel Alejandro Marín, Bharat Panwar, Joan Planas-Iglesias, Daniel Poglayen, Jing Cui, Andre O. Falcao, Christine Suver, Bruce Hoff, Venkat S. K. Balagurusamy, Donna Dillenberger, Elias Chaibub Neto, Thea Norman, Tero Aittokallio, Muhammad Ammad-ud-din, Chloe-Agathe Azencott, Víctor Bellón, Valentina Boeva, Kerstin Bunte, Himanshu Chheda, Lu Cheng, Jukka Corander, Michel Dumontier, Anna Goldenberg, Peddinti Gopalacharyulu, Mohsen Hajiloo, Daniel Hidru, Alok Jaiswal, Samuel Kaski, Beyrem Khalfaoui, Suleiman Ali Khan, Eric R. Kramer, Pekka Marttinen, Aziz M. Mezlini, Bhuvan Molparia, Matti Pirinen, Janna Saarela, Matthias Samwald, Véronique Stoven, Hao Tang, Jing Tang, Ali Torkamani, Jean-Phillipe Vert, Bo Wang, Tao Wang, Krister Wennerberg, Nathan E. Wineinger, Guanghua Xiao, Yang Xie, Rae Yeung, Xiaowei Zhan, Cheng Zhao, Jeff Greenberg, Joel Kremer, Kaleb Michaud, Anne Barton, Marieke Coenen, Xavier Mariette, Corinne Miceli, Nancy Shadick, Michael Weinblatt, Niek de Vries, Paul P. Tak, Danielle Gerlag, Tom W. J. Huizinga, Fina Kurreeman, Cornelia F. Allaart, S. Louis Bridges, Lindsey Criswell, Larry Moreland, Lars Klareskog, Saedis Saevarsdottir, Leonid Padyukov, Peter K. Gregersen, Stephen Friend, Robert Plenge, Gustavo Stolovitzky, Baldo Oliva, Yuanfang Guan, Lara M. Mangravite. Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis. Nature Communications, 7(1), Springer Science and Business Media LLC, 2016 [Biblios]
Jesus, Ana Sofia Grave de, Falcão, André Osório e Cruz de Azerêdo. Inference of binding affinity from neuronal receptors in humans. Master's dissertation, 2016 [Biblios]
Federica Eduati, Lara M Mangravite, Tao Wang, Hao Tang, J Christopher Bare, Ruili Huang, Thea Norman, Mike Kellen, Michael P Menden, Jichen Yang, Xiaowei Zhan, Rui Zhong, Guanghua Xiao, Menghang Xia, Nour Abdo, Oksana Kosyk, Stephen Friend, Allen Dearry, Anton Simeonov, Raymond R Tice, Ivan Rusyn, Fred A Wright, Gustavo Stolovitzky, Yang Xie, Julio Saez-Rodriguez, Andre O Falcao [within Consortium], Ana L Teixeira. Prediction of human population responses to toxic compounds by a collaborative competition. Nature Biotechnology, 33(9):933-940, Springer Science and Business Media LLC, 2015 [Biblios]
Luka A. Clarke, Hugo M. Botelho, Lisete Sousa, Andre O. Falcao, Margarida D. Amaral. Transcriptome meta-analysis reveals common differential and global gene expression profiles in cystic fibrosis and other respiratory disorders and identifies CFTR regulators. BMC GENOMICS, 106(5):268-277, Elsevier BV, 2015 [Biblios]
Vânia Alexandra Conceição Ferreira, André Osório e Cruz de Azerêdo Falcão. Modeling CNS receptor binding profiles of small molecules. Master's dissertation, 2015 [Biblios]
Joana Carina Marques Barros, André Osório e Cruz de Azerêdo Falcão. Mining cardiac side-effects of known drugs. Master's dissertation, 2015 [Biblios]
Andreia Carina Pereira da Silva, André Osório Falcão. Positional Amino Acid Frequency Patterns for Automatic Protein Annotation. Master's dissertation, 2015 [Biblios]
Ana L. Teixeira, Andre O. Falcao. Structural Similarity Based Kriging for Quantitative Structure Activity and Property Relationship Modeling. Journal of Chemical Information and Modeling, 54(7):1833-1849, American Chemical Society (ACS), 2014 [Biblios]
J.M. Siqueira, T.A. Paço, J.C. Silvestre, F.L. Santos, A.O. Falcão, L.S. Pereira. Generating fuzzy rules by learning from olive tree transpiration measurement – An algorithm to automatize Granier sap flow data analysis. Computers and Electronics in Agriculture, 101, Elsevier BV, 2014 [Biblios]
A.F. Marques, C. Rosset, J. Rasinmaki, H. Vacik, S. Gordon, S. Nobre, A. Falcao, D. Weber, M. Granitzer, L.O. Eriksson. Collaborative development of a semantic wiki on forest management decision support. Scandinavian Journal of Forest Research, 29(sup1):30-43, Informa UK Limited, 2014 [Biblios]
Carlos Duarte, Luis Carriço, David Costa, Daniel Costa, André Falcão, Luís Tavares. Welcoming gesture recognition into autism therapy. In ACM SIGCHI Conference on Human Factors in Computing Systems (CHI '14, EA), 2014 [Biblios]
Ana L. Teixeira, Andre O. Falcao. Noncontiguous Atom Matching Structural Similarity Function. Journal of Chemical Information and Modeling, 53(10):2511-2524, American Chemical Society (ACS), 2013 [Biblios]
Ana L Teixeira, João P Leal, Andre O Falcao. Random forests for feature selection in QSPR Models – an application for predicting standard enthalpy of formation of hydrocarbons. Journal of Cheminformatics, 5(1), Springer Science and Business Media LLC, 2013 [Biblios]
Ines Filipa Martins, Ana L. Teixeira, Luis Pinheiro, Andre O. Falcao. A Bayesian Approach to in Silico Blood-Brain Barrier Penetration Modeling. Journal of Chemical Information and Modeling, 52(6):1686-1697, American Chemical Society (ACS), 2012 [Biblios]
Lívia Madureira, Luis C. Nunes, José G. Borges, André O. Falcão. Assessing forest management strategies using a contingent valuation approach and advanced visualisation techniques: A Portuguese case study. JOURNAL OF FOREST ECONOMICS, 17(4):399-414, 2011 [Biblios]